Need Haplogroups Information

Hi All,

I am trying to download haplogroup information for Mitochondrial DNA and Y chromosomal DNA. I would like to know if there are any databases to do so. I would also like to know , how to download the MTtree given in Phylotree.org ?

snp r software error

• 1,374 views • link

written 9.2 years ago by Inquisitive8995

0 answers

No answers yet.

More posts like this

Method for estimation of subcontinental admixture from haplogroup data
written 5.6 years ago by irieljoerin •

Hi all, I would like to know if there exist any bioinformatic tool, R package, or free access software for estimation of subcontinental admixture proportions …
How to get nuclear and mitochondrial gene sequences ?
written 7.1 years ago by kA •

Hi, As part of a script that i'm writing, I need to get the sequence of any desired mitochondrial and nuclear gene of a species …
Tissue specific proteomics or gene expression data
written 7.1 years ago by Natasha •

I have a sent of UNIPROT protein identifiers. I am trying to download the tissue specific gene expression ofr proteomics data from databases link PRIDE …
Create chromosome painter using trio sample data
written 7.9 years ago by Inquisitive8995

Hello all, I am trying to find a stand-alone tool which could give me an image like given below that would highlight the regions of …
In RNA Seq, How does the AT content help us to know if the data is contaminated ?
written 7.9 years ago by Inquisitive8995

Hello, I would like to know if the AT content of an RNA-Seq data play any role in determining if our data was contaminated ? …
autosomal ancestry inference
written 8.0 years ago by J.F.Jiang

Hi all, I am very interested in ancestry inference. 1. autosomal ancestry I've followed the tutorial from https://github.com/pcgoddard/Burchardlab_Tutorials/wiki/ADMIXTURE#popfile. However, decision on cluster information K is …
Maternal and Paternal Haplogroups Assignment Package
written 8.3 years ago by Shicheng Guo

Any one share a R package or Perl package to do Maternal and Paternal Haplogroups Assignment . https://www.familytreemagazine.com/premium/top-genetic-genealogy-tools/ https://aurora-mareviv.github.io/mthapower/ Companies like 23andMe and the Geno …
Hash key to map Y haplotype to haplogroup
written 8.3 years ago by Shicheng Guo

Hi All, I hope to find a bridge to connect Y haplotype and Y haplogroup? Is there any hash key or dictionary to share with …
Getting PFAM database
written 9.5 years ago by s.kyungyong64 •

Hi, I am trying to run PFAM locally. I need to download some databases from the website: ftp://ftp.ebi.ac.uk/pub/databases/Pfam/current_release/ But there are too many files and …
Free Genetic Genealogy Software
written 9.5 years ago by dr.genetics

I am looking for a software that can take SNPs information as input (e.g. a 23andme genomic data file) and haplogroup as output, and ideally …