This is a test version of Biostars. For the public version, visit https://www.biostars.org.
chipseq data analysis

can anybody please tell me how to implement the logistic regression on chip seq data after extracting features like distance from tss and peak breadth and peak count

chip-seq r
• 1,919 views • link
updated by Carlo Yague Carlo Yague • written by praveenhcu131 • praveenhcu131

1 answer

You can do it in R with the glm function. If you google around, you will find many examples of such regressions.

• 0 views • link
written by Carlo Yague Carlo Yague

This is going to be hard if you don't know how to use R because it takes a bit of learning. Alternatively, doing a logistic regression is also possible with Excel.

If you want to stick with R, you can usually load any kind of text data using read.table().

• 0 views • link
written by Carlo Yague Carlo Yague

Log in to answer this question.

More posts like this