freebayes issue for BAM file
Hi, I am doing variant allele discovery via freebayes. However, I always got Opened BAM reader without index file, jumping is disabled. could not find SM: in @RG tag @RG ID:FASTQ_Groomer_on_data_1. Can anybody help me to figure it out?
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Pierre Lindenbaum
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shangzhenhua08 •
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shangzhenhua08 •
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The message is clear: your BAM header is missing a sample name (SM) in the read group (RG) see :
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Pierre Lindenbaum
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