Thank you, that was exactly I was looking for.
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Hi everybody; I have identified some piRNAS from miRNA-seq, but I want to know if exists a database like mirwalk that contains a list of predicted and validated posible gene (or proteins) target interactions. Somebody knows if it is possible??
It is different than miRNA target identification. piRNAs have a perfect match to the target sequence so identifying the genomic features to which your reads map to will give you the targets. You can do that using bedtools intersect for instance. Now there a few things to bear in mind:
Thank you, that was exactly I was looking for.
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