How can I get Tabular output using HMMer
Dear all, I want to use HMMer to search some sequences and I want a tabular output. The user guide told me to add "--tblout" within the command, and I did it, then, I got this result:
Incorrect number of command line arguments. Usage: phmmer [-options] <seqfile> <seqdb>
where basic options are: -h : show brief help on version and usage
To see more help on available options, do phmmer -h
I did many attempts, but got the same result. Hope anyone can help me. Thank you!
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The message indicates that you're missing something on your command line. Did you specify an output file after --tblout i.e. --tblout /path/to/output/file ?
Ok, I got the idea. Many thanks.