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How to convert bedgraph to bigwig?

Hi everybody, I want to convert my bedgraph (from MACS2) into a bigwig, is there any available program different than bedgraphtobigwig (I have problems with the instalation)

Thanks

chip-seq macs
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written by Lila M Lila M

you'd better tell us about this:

I have problems with the instalation

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written by Pierre Lindenbaum Pierre Lindenbaum

1 answer

There should not be any installation. You just download the binary and run it.

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written by igor igor

Go here, choose your OS, and download all the Kent binaries you need.

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written by apa@stowers apa@stowers

I've downloaded, but when I want to run it " bedGraphToBigWig: command not found"

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written by Lila M Lila M

Is not that problem, because I'm trying to run it from the path in which is downloaded

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written by Lila M Lila M

Try running ./bedGraphToBigWig (in current directory), not bedGraphToBigWig (searches $PATH).

You may also need to make it executable (chmod a+x ./bedGraphToBigWig)

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written by igor igor

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