Downloading protein sequences for a set of gene IDs from NCBI.
Hi All,
I have around 5000 Gene IDs of a particular species. I would like to retrieve all protein sequences for those gene ID.
What I tried: 1) from NCBI ftp, we can get the protein sequences of a various species. 2) E-utility from NCBI. but not able to download.
Please help me.
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Perhaps a slightly "brutal" approach, but I would just download everything for your species of interest and then filter the obtained data in command line. Since you are looking for 5000 proteins you are already looking for a big subset of all proteins...
Hi Sir,
Kindly let me know how to do it for 100 gene ID atleast.