Hi, I would check if my database of annovar is up-to date. This link show the date of the last update Annovar download
How can i do it ? without download the last database and compare it with the version use ? How print the creation's date of my database ? Thanks a lot.
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guipagui •
In the humandb folder there is a annovar_downdb.log that will show the version of the database download.
Please note that this will only show the version of the database being downloaded, so it must be checked for each time after it completes.
You can also use
perl annotate_variation.pl -webfrom annovar -downdb avdblist -buildver hg19 .
to get a list of all db versions.
Hope this helps :).
Hi, I didn't know the file "annovar_downdb.log". But i search a command for get dynamically the version of database. However i guess this task isn't possible....
Yes of course. I think "diff" can do this. I hope command as :
perl <perl script=""> <file db="">(ex : refgene) -v | --version
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