Hi, I am new to HOMER and I'm having a hard time interpreting and producing the XY scatter plots below using excel,
From what I understand the distributions of H3K4me3 and H3K4me1 are plotted around the AR peaks, I am not sure how to interpret this plot,here is what I understand: 1. 0,0 is where the AR peak is located 2.Y axis shows H3K4me3 distribution with respect to the AR peak 3.X axis shows H3K4me1 distribution with respect to the AR peak if 1-3 are true I still cannot fully understand how you can interpret the results, can you provide a simple interpretation? I know homer has a tutorial for excel " "Mastering Excel for Genomics Analysis”
Is there a similar tutorial for creating the XY scatter plots below? Any resources/help would be enormously appreciated.
