This is a test version of Biostars. For the public version, visit https://www.biostars.org.
SGA Assembler Indexing Error

Trying to index fastq reads but getting error Already preprocess fastq file using sga preprocess READS > out.fastq command.

sga index datafastq/humanUpairedSGA.fastq

Building index for /home/rafay/datafastq/humanUpairedSGA.fastq in memory using SAIS
initializing SA
terminate called after throwing an instance of 'std::bad_alloc'
  what():  std::bad_alloc
assembly ngs denovo

0 answers

No answers yet.

Log in to answer this question.