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Mafft 7.0 "Allocation error"

Hi everyone! I was trying to align 12S sequences into Mafft and I got this error message, while the program was calculating the distance matrix:

Making a distance matrix...

Allocation error( 541556284 int vec )

I found where, inside the program (this is the link: http://bugs.arb-home.de/browser/trunk/GDE/MAFFT/mafft-7.053-without-extensions/core/mtxutl.c?rev=10348), the error is generated (line 239 in the link), but I do not understand the programming language, so I was hoping if someone could tell me what is happening and why I get this error...

All the help is more than welcome!

Thanks

Luca

software error alignment gene
• 4,021 views • link
written by luca • luca

First Link is not working, and the error is from line 245 to 250 reason is 

tri = (float **)calloc( (unsigned int)ll1+1, sizeof( float * ) );

as the error declared there is no enough memory to allocate this variable for your run can you write info about the machine, OS tht you run the program on; I think it is memory issue

• 0 views • link
written by Medhat Medhat

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