interpretation if fastqc
yellow box in Per base sequence quality, what is mean?anyone can explain about it
• 1,454 views
•
link
updated
by
Devon Ryan
•
written
by
khatami.s.83 •
•
written
by
khatami.s.83 •
1 answer
The green, yellow, and red colored boxes in the "Per base sequence quality" section of the FastQC output indicate vague ranges of "good", "ok", "not so great" base call quality.
• 0 views
•
link
written
by
Devon Ryan
Log in to answer this question.
More posts like this
-
why my fastqc on trimmed data failed?
written by kamran.kouchakzadeh.kk •
-
Still bad phred score after fastp
written by SpliceAndScript •
-
No boxplots on my FastQC report
written by sara.vandenbosch •
-
Per base sequence Quality in Fast QC report
written by Fizzah •
-
FASTQC - Good "Per Base Sequence Quality" but Bad "Per Tile Sequence Quality"?
written by cg1440 •
-
Fastq file with very high per base sequence quality and no box-whisker plot
written by priya.saxena •
-
FastQC:"Per Base Sequence Quality"
written by l.ushanoff •
-
Meaning of Per sequence quality scores in FastQC
written by khatami.s.83 •
-
FastQC: box plots without boxes?
written by khaynes •
-
Understanding Fastqc Output- Please Help
written by Kash
Please be more informative when asking questions.