Variant Effect Predictor API, dbSNP annotation
Quick question for those running VEP using local API, if I am looking to annotate variant calls does VEP annotate dbSNP rs numbers or do you need to do that prior to running VEP (with something like SnpSift)?
EDIT: never mind, completely missed the --check_existing flag.
Carry on, nothing to see here :)
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