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SNP data anlaysis

Hello ~

I try to make breast cancer case and control dataset to analyze in Plink.

I don't have any dataset like WTCCC

so I try to make dataset using GEO.

https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE19594

to make plink .ped and .map file I don't know how to process these dataset.

Please help me~

Thank you so much!

snp

Hello 496527!

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PS: Exact duplicate

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