How to extract multiple header from fasta file
Pls help, anyone know how to extract multiple header from a fasta file using perl?
• 5,438 views
•
link
updated
by
mastal511
•
written
by
fongsiongshawn •
•
written
by
fongsiongshawn •
2 answers
Not perl, but maybe a much simpler way: Create a blast db of your fasta file and use blastdbcmd.
Explained here
• 0 views
•
link
written
by
David Langenberger
Log in to answer this question.
More posts like this
-
How to edit the fasta headers?
written by p •
-
How to extract fasta sequences and only its ID's, based on the subsequence fasta numbers from a mai…
written by sunnykevin97
-
How to extract a specific gene sequence from a batch of genome files that I have?
written by drdrnaveenkumar •
-
How to extract SNPs from multiple alignment fasta file?
written by pltbiotech_tkarthi
-
Docking result not same as crystal reference
written by fongsiongshawn •
-
Perl script for analyze sequence
written by fongsiongshawn •
-
Perl script for analyze sequence
written by fongsiongshawn •
-
Perl basic script and project
written by fongsiongshawn •
-
How To Extract Only Geneid From Fasta Header?
written by Abdul Rawoof
-
Extracting Multiple Fasta Sequences At A Time From A File Containing Many Sequences
written by Sarah •
what have you tried ? show us the code
Dear fongsiongshawn, Hi
Is there any help here for you?
~ Best
It's good that you've to this forum to ask, but in many cases, try upgrade your googling skill. Your exact question has been answered in the thread mentioned by Farbod