identify amplified genes from GISTIC2.0
As I used GISTIC2.0 to deal with SNP6.0 profiles. I got result files, in which showed the amplification/deletion of chromosome regions. Could I think genes in the wide peak of amplified regions were amplified. If not, how could I got those amplified or deleted genes for the whole group of patients from GISTIC2.0.
• 1,971 views
•
link
updated
by
Biostar
•
written
by
jamesrenwu •
•
written
by
jamesrenwu •
0 answers
No answers yet.
Log in to answer this question.
More posts like this
-
How to know protomter position in the chromosome?
written by sunyeping •
-
Significant q-value with 0 actual copy change sample in GISTIC2.0 result.
written by 현호 •
-
Should I run GISTIC2.0 for cases/controls separately?
written by @e95917ed •
-
Amp/Del genes in GISTIC2.0 output but not covered in original exome-seq baits
written by diana.yue.zhao •
-
GISTIC results. Too many deleted genes?
written by rin •
-
a problem in GISTIC2.0 calculation
written by jamesrenwu •
-
a problem with the result of GISTIC2.0
written by jamesrenwu •
-
How to interpret this CNV results
written by Jackie
-
JISTIC excluded regions
written by Avro
-
Finding All The Genes That Are In A Given Set Of Genomic Co-Ordinates Using R
written by Ankur •
