How to include interaction in logistic model using plink
I tried using the flag --interaction with --logistic but it always gets deprecated in plink. An err msg says using --linear interaction but that does not work for logistic regression. Anyone knows how to include interaction between phenotype and covariates in additive logistic models using plink?
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Philipp Bayer
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lucia •
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lucia •
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If I understand correctly (using PLINK2)
plink --logistic genotypic interaction --file your_file etc.
so without the --
Example from the manual:
plink --bfile mydata --linear genotypic interaction --covar tmp.cov --parameters 1-4, 7
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