gene name in vcf file
Hello!
I have VCF files and should like to add gene name. I tried by bcftool annotation.. but not got success
I have a gtf file and bed file in this formate:
(1 161452 161506 "ENSSSCG00000030218 . - ensembl exon ....... )
Can someone help me? thanksss
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Sean Davis
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call •
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call •
1 answer
I would suggest using a tool such as snpEff, annovar, Ensembl VEP, or the Bioconductor VariantAnnotation package for this task.
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