SNPEFF Sequence Ontology Terms that are equivalent to a Loss of Function
0
0
Entering edit mode
7.6 years ago

I'm writing a script that will identify loss of function mutations in a SNPEFF-annotated MAF file containing point mutations, indels or, in some cases, both.

So far, I've been doing this is by typing up a list of every Sequence Ontology value that indicates a loss of function:

stop_gained start_lost etc

But I suspect this has already been done and wonder if someone can point me if the right direction of finding such a list.

snp sequencing • 1.7k views
ADD COMMENT

Login before adding your answer.

Traffic: 2497 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6