Is it possible to run VEP on a merged VCF file derived from a 30 VCFs from the separate reference gene alignments? And is there …

What software is adequate for the mapping and variant calling of the Hepatatitis B genome samples?

What cloud software is the most appropriate for WGS NGS data computations on tuberculosis data? Need to develop a cloud-based web service for the tuberculosis …

How to delete not necessary tools from the local Galaxy instance? I want to use Galaxy as the backend for WGS microbe data processing and …

Hi List, Is there any way to get RNAfold predicted secondary structure in text format? It provides a PDF and PNG file but is it …

Dear BioStars community: I would like to know if there is a software or script that calculates Hudson's Fst estimator (http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1205159/) at both Population and …

<p>I am looking for any tools to help design the linker region between fusion proteins. LINKER as described here <a href='http://www.ncbi.nlm.nih.gov/pmc/articles/PMC441560/#!po=12.5000'>http://www.ncbi.nlm.nih.gov/pmc/articles/PMC441560/#!po=12.5000</a> seems ideal, but unfortunately …

Update: The site is down even though it was published in Nature Communications only 2 years ago. http://www.nature.com/articles/ncomms7275 ---------- <p>I have just discovered the following …

VAAST (the Variant Annotation, Analysis and Search Tool) is a probabilistic search tool for identifying damaged genes and their disease-causing variants in personal genome sequences. …

<p>I'm looking at:</p> <ul> <li><a href='http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3046040/?log$=activity'>http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3046040/?log$=activity</a> and </li> <li><a href='http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3046040/bin/97320630005350S1.pdf'>http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3046040/bin/97320630005350S1.pdf</a> </li> </ul> <p>And the sample implementation of the algorithm seems to be broken (I see …