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Mutation data from ICGC

I want to download the mutation data of 50 specific genes by individuals from ICGC data. Is it possible to get this information without difficult bioinfomatics analysis?

genome
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updated by ivivek_ngs ivivek_ngs • written by kofujikura • kofujikura

2 answers

Hi, recently I try to download some data. But I can't generate the token. How about you? Thanks

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written by hanpengyong • hanpengyong

What kind of data are you intended to download, the data security is up now and if I am correct the direct download is as of now disabled unless one request access. It is due to the migration of TCGA to DCC. Better to check this link

I would also suggest taking a look at websites like cBioportal or OASIS or COSMIC (if acconting for somatic mutations). You can get all information of gene-related data for all mutations for samples from there and download this information from there itself.

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written by ivivek_ngs ivivek_ngs

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