This is a test version of Biostars. For the public version, visit https://www.biostars.org.
upload Multiple custom tracks on ucsc

I have 8 bedgraph files (made from bed file). I want to upload (I don't have access to any ftp to upload there) all of them and compare them on UCSC. do you guys know how I can upload them together? thanks

genome next-gen

Unless you need other annotation tracks from UCSC use a local genome viewer (IGV) as has been suggested in other threads you have on this topic. There is no way to get around the http/ftp server requirement if your files will not directly upload to UCSC because of their size.

1 answer

It's a clumsy workaround but you can upload your 8 tracks onto Galaxy first and then click "display at UCSC main" successively for each track until they are all on a single UCSC session.

As Genomax said, a local viewer is preferable.

Log in to answer this question.