RNA-Seq Expression Project for Oncology
Hi,
do you know a repository or GEO accession to access something like GSE2109 but for RNA-Seq???
GSE2109 is array based cancerous samples
I was searching for a large amount of cancerous samples where I found many in microarray for example GSE2109 contains more than 2000 CEL files. I am asking about a similar accession or repository for RNA-Seq samples.
thank you
1 answer
This is quantified expression for TCGA dataset,
RNA-Seq data for 9264 tumor samples and 741 normal samples across 24 cancer types from The Cancer Genome Atlas with "Rsubread"
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Didn't understand your question.
Sorry, I mean I was searching for a large amount of cancerous samples where I found many in microarray for example GSE2109 contains more than 2000 CEL files. I am asking about a similar accession or repository for RNA-Seq samples.
Thank you
Check TCGA portal.