Entering edit mode
8.0 years ago
chipseq33
▴
10
hello all,
I would like to install randfold-2.0.1 but I get this error squid.h: No such file or directory
gcc -O3 -I. -I/bin/squid-1.9g -L/bin/squid-1.9g -o randfold params.o energy_par.o fold.o fold_vars.o utils.o randfold.c -lm -lsquid
randfold.c:25:18: fatal error: squid.h: No such file or directory
#include<squid.h>
I checked /bin/squid-1.9g but there is no squid.h in it.
could you please help me with this ?
thanks
You can find the squid library here. Download, configure and make. This will produce the squid.h file. Put that in library path.
Thanks! I just did what you kindly suggested. after running "make" I got this error:
cannot find -lbam
any thought?
Thanks
Do you have samtools installed? That should have libbam in it.
yes, it is installed on our server and it is in my path, too.
I have a problem installing randfold
I installed the squid-1.9g library, I modified the Makefile file. And I get the following error:
I hope they can help me
best
i am having the exact same issue...any one got the solution for this? thank you