I'm looking for orthologs to various S. cerevisiae genes, i.e. the "Comparative Info" section of https://yeastgenome.org/locus/S000005299 However, neither SGD nor Alliance have any information for …

Hello, everyone. I am new to bioinformatics. Currently, I want to analyze whole genome sequence data from GTEx bam files. But I have no idea …

Hello, Does any one ever use DRIMM-synteny to detect the synteny blocks in multiple plant genomes? I download the program from http://bix.ucsd.edu/projects/drimm/, but there is …

Could someone point me out to fastq short sequence reads and its corresponding assembled fasta file for learning assembly from sequencing reads? Data can be …

Hello, Asked this question on Reddit and got slammed for it, not sure why. I'm a professional software developer very interested in bioinformatics (specifically canine …

Hello all, I was wondering if www.pantherdb.org is still up and running? It seems I can not access the site and can't find any information …

Hello all, I am working on my RNA-seq data of a non-model plant and I want to find genes involved in a metabolic pathway. I …

<p>Hi I am new to RAD tag sequencing. I want to set up SNP marker development pipeline using RAD sequencing for Plant Genome data. Could …

<p>I couldnt find any gene corresponding to RAG on the ucsc database. </p> <p>Is RAG available in the browser under some other name ? I …

<p>I was wondering if there is any instance of galaxy out which has SHRIMP2 aligner? I Googled and searched but could not find one</p> <p>Thanks</p>