Downloading sequences of genes related to a pathway in PlantCyc (or other cyc related databases) and KEGG
Hello all,
I am working on my RNA-seq data of a non-model plant and I want to find genes involved in a metabolic pathway. I want to download all sequences of genes involved in an individual pathway in .fasta format and then blast our assembled transcripts against it. For example all genes involved in secondary metabolites biosynthesis.
Does anyone know a way to download such sequences from any database such as PlantCyc, KEGG, or others?
Thank you in advance
• 261 views
•
link
0 answers
No answers yet.
Log in to answer this question.