Is there a recombination map for the HapMap populations that were studied?
The hapmap has a recombination map that combines data from all of the individuals they studied here. I was wondering if maps for each of the populations they studied were available? (YRI, JPT, CHB, CEU)
What is the most complete vcf file of population allele frequencies that can be built/downloaded from public datasets nowadays? About 5 years or so ago, …
<p>Hello all,</p> <p>So, I have been trying to implement the CMS code (<a href='http://www.broadinstitute.org/scientific-community/science/programs/medical-and-population-genetics/cms/code'>http://www.broadinstitute.org/scientific-community/science/programs/medical-and-population-genetics/cms/code</a>) in order to search for signals of positive selection in a …
<p>Hi all, I am interested in calculating the integrated haplotype score (iHS) for SNPs surrounding a large candidate region of a particular human chromosome. <br …