Looking for hairpin loops
Hey! Im trying to use Python to write a code that will find hairpin loops in single strand DNA or RNA. Can anyone help me? Many Thanks.
dna
structure
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Can you remember the last place you had them?
Hahah, i'm not funny at all - check UNAfold. I used it a few years ago to fold ssDNA to detect hairpins (via python subprocess), although there's probably newer stuff out there now... I don't know.