Hello ! I downloaded the nr database from NCBI : update_blastdb.pl --decompress nr [*] and would like to make a seaprate database only for fungi. …

Howdy! Is anyone familiar with running synteny analysis on uncharacterized genes? I am trying to run a local synteny analysis between two closely related species …

I've been looking at tools to predict variant effects in non-human organisms (other mammalian species). I'm aware of polyphen-2 and SIFT, and really need a …

Hello, I am new to bioinformatics and trying to replicate a 16S rRNA analysis study. I am currently stuck at a section where the authors …

Im learning how to analyce single-cell data with SCENIC, following It's tutorial (http://htmlpreview.github.io/?https://github.com/aertslab/SCENIC/blob/master/inst/doc/SCENIC_Running.html). They ask me te choose a RcisTarget database for Mouse, but even …

Hello all, I was wondering are there any really good new tools that predict missense effect in non-model species, on a genome scale? Provean seems …

Hi, I have a list of sig changed genes from staphylococcus aureus and want to do the go enrichment analysis with topGo in R. However …

Hi Guys, I run into a simple biological question: using the sequence from a particular RNA to find any SHORT potential sequence complementarity of this …

Hi all, I am trying to download both the genes that have been heterozygous knockout and the resulted phenotypes from MGI (Mouse Genome Informatics) database. …

Hello, My name is Anik. I am new to this website. I want to perform genome-wide association mapping for plant disease-resistant genes. Since this field …