tophat library type for Illumina TruSeq RNA sample prep v2
Hi,
I am trying to align RNAseq reads for which the libraries were prepped with the Illumina TruSeq RNA Sample Prep v2 kit. Would this library type be firststrand?
Thanks!
• 3,013 views
•
link
updated
by
shanika.amarasinghe •
•
written
by
acorella •
•
written
by
acorella •
1 answer
Will this answer your question? Tophat Library-Type : Illumina Truseq Stranded Total Rna Sample Prep Kit
Cheers, Shani.
• 0 views
•
link
written
by
shanika.amarasinghe •
Log in to answer this question.
More posts like this
-
Truseq Stranded Total RNA and NEBNext Ultra II Directional RNA library prep kit
written by deniz •
-
RNA-seq adaptor sequence
written by Arindam Ghosh
-
Read pair orientation : Illumina TruSeq Stranded mRNA library
written by erwan.scaon
-
SRA data sets and runs
written by MAPK
-
Trimming Adaptor in Small RNA Analysis
written by ebrahimiet •
-
Illumina adaptor to be trimmed from fastq RNAseq files
written by ebrahimiet •
-
TruSeq RNA Library Prep Kit v2
written by lamlam •
-
Detection of (novel) lnc-RNAs in 'normal' RNA-Seq data
written by aggregatibacter
-
Using htseq-count when a stranded library was assumed to be unstranded during tophat2 mapping
written by cajawe •
-
consistent problem of strand-specific information between TopHat/RSeQC/picard
written by pengchy
Tophat Library-Type : Illumina Truseq Stranded Total Rna Sample Prep Kit