Tool for create a phylogenic tree from a spreadsheet with species abundance
Hi, The metagenomes that I current working are hosted at JGI.I wanted to generate a phylogenetic tree,but I don`t like the one generated by IMG.I have the options of export a spreadsheet with the genome counts or newick format and I want to know if anyone knows a tool to generates tree that accept a table as input? Thank you for the help.
Nayara
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Have you checked the tool cluster and then view it with Java Tree view, that might be checked for your purpose. I have used them for chipseq but I believe you can used them for your purpose as well if it is tablular format of genome counts for windows. Or you can take a look at this link if anything is of your help. Have you also checked this tool
I will take a look on the tools you suggest.Thank you :)