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Question: IGV zoom into alignment
2
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I am using IGV to look at some RNA-seq alignment. In general I find this tool extremely helpful. However, when looking at some longer genes I am unable to visualize the alignment and I receive the message: "Zoom in to see alignment".
Is there a way to change this setting to visualize the entire gene (maybe by increasing memory usage of the tool?). Does anybody know how to do this?

ADD COMMENTlink 3.9 years ago lkmklsmn • 880 • updated 3.9 years ago igor 7.7k
5
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Go to View > Preferences. Then in Alignments tab, change the Visibility range threshold field.

ADD COMMENTlink 3.9 years ago igor 7.7k

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