How to create local database from my sequence for blast search with biopython not in downloaded one
Please help! I can't understand how to create a local database from my own sequence. I want localy search some "db" sequences with my own sequences. Why BioPython can't creat a db from my sequences? How can I do my local database?
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mastal511
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antutilo •
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antutilo •
1 answer
You can download standalone blastplus and format your sequences into a database using the makeblastdb command.
See the blastplus manual:
http://www.ncbi.nlm.nih.gov/books/NBK279690//a>
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