Finding Motif Representation Of A Given Secondary Structure Of Rna Sequence
Name of any site or tool where i can get the motif representation if i give secondary structure of RNA Sequence
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Peter Kovac •
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Cinita Mary Mathew •
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Cinita Mary Mathew •
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Our lab has developed RNArobo, maybe it can help you.
RNArobo is an RNA structural motif search tool. RNArobo can search sequence databases in FASTA format for a motif defined by a descriptor, which can specify primary and secondary structure constraints. ... RNArobo enables you to allow nucleotide insertions in a structural element.
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Peter Kovac •
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You need to clarify. Motif representations are usually summaries -- do you have >1 RNA secondary structure and you want to find the common elements?