CIGAR string 18M2D19M
1, What is the meaning of the following CIGAR string: 18M2D19M ?
CIGAR string: 18M2D19M
• 1,322 views
•
link
written
by
llllllll12 •
0 answers
No answers yet.
Log in to answer this question.
More posts like this
-
I got qlen = 276 using bam_cigar2qlen in htslib but I count that cigar by myself, it should be 263.
written by Aaron •
-
Samtools Filter by CIGAR string
written by Ruoshui •
-
Tool for extracting part of aligned sequence by CIGAR string
written by Charles-Alexandre Roy •
-
BWA cigar not corresponding to reality
written by ADDNOTHIING •
-
How to know the aligned base of a specific position from a read
written by irfanwustl •
-
Extracting CIGAR string from a specific region of a read in a bam file using pysam?
written by kiki4133 •
-
How to convert from a cigar string to extended cigar string?
written by omariqbal2017 •
-
the theory , algorithms, file formats
written by llllllll12 •
-
Cigar String - Are Soft Clipped Reads Only Ever At The Start Or End?
written by Clare
-
What Does This Cigar Mean?
written by Gangcai
Hello sofiazizi12
As I said on your other question, please don't ask this forum to do your homework for you. You can easily glean this info from the samtools specification https://samtools.github.io/hts-specs/SAMv1.pdf