No one knows how to get single copy orthologs from orthomcl output?
0 answers
No answers yet.
Log in to answer this question.
More posts like this
-
How to evaluate phylogenetic congruence between two phylogenetic tree?
written by Kumar
-
Best method for phylogeny on bacterial genes
written by vujex •
-
Concatenate multiple MUSCLE alignment result to build a phylogenetic tree
written by huiyus97 •
-
Phylogenetic tree from single copy core genes (metazoa proteomes)
written by Elizabeth •
-
single copy genes for phylogenetic tree after orthomcl tool
written by Mehmet
-
phylogenetic tree after ortholog finding by orthoMCL
written by Mehmet
-
16S rRNA alignment
written by m.sabrysarhan •
-
how to find ortholog genes in assembled transcriptome and make phylogenetic tree with close taxonom…
written by Mehmet
-
How to perform phylogenetic Tree construction using R-package (ape)
written by sunilthorat •
-
Augustus training and artemis
written by Mehmet
Try running BUSCO to find Single copy orthologs on your gene set.
Hello Mehmet!
Questions similar to yours can already be found at:
We have closed your question to allow us to keep similar content in the same thread.
If you disagree with this please tell us why in a reply below. We'll be happy to talk about it.
Cheers!
Hello Michael:
It was me opening the previous section about single copy genes, but I couldn't get answer, so this is why I have asked again.
Try to update your question with more examples, toy data, edited questions go up in the display rank for any significant edit.