Fairly new to the use of bcftools, I am trying to create a vcf file by typing the following:
bcftools view -v -c -g output.bcf > output.vcf
However, I receive the following error message: the argument to -g not recognised. Expected one of hom/het/miss/^hom/^het/^miss, got "output.bcf".
I confirm that I am in the right directory and even tried to give the full directory but without success. Unfortunately, I cannot find details online on how to solve this issue.
Any help would be much appreciated.