MEGAN - changing query coverage? HELP
Hello,
Does anyone know if it is possible to change the parameters in MEGAN to only consider fragments with 100% query coverage?
When attempting the change the LCA parameters I cannot find an option to do so. I understand that the bit-score takes into account query coverage, so does anyone know how to adjust the bit-score value to only consider sequences with high query coverage? Or any alternative suggestions?
Any help would be much appreciated!
Thanks
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