When I write custom annotations to my working genbank object in the form of
genbankObject.annoations["new key"]= "new value"
I can't get it to print out when I go to write it. SeqIO.write(genbankObject, outfile, genbank) just refuses to put in those new fields. It works when I switch it to "accession" of "source", but I need to add information like "reference" bases, and there's just no instance of that in the source code anywhere.
I want to dive into the source code to figure out why.
1 answer
http://biopython.org/wiki/SourceCode
http://biopython.org/wiki/Download
Note the Github link, for SeqIO: https://github.com/biopython/biopython/tree/master/Bio/SeqIO
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written
by
Chris Fields
The SeqIO code (if it's anything like bioperl) iteratively returns a sequence record object (SeqRecord). May want to look for that?
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written
by
Chris Fields
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