PSMC: create pseudo-diploid male X chromosomes from different species
Hi,
I have male X chromosome data in fq format from different ape species and I was wondering if there is an existing method to merge them in order to create pseudo-diploid X chromosomes for PSMC analysis?
Note that some loci in the consensus sequence appear as polymorphic, so my guess is that I first have to mask those out?
Thanks!
Yorgos
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yorgos.athanasiadis •
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