I have a list of GO terms. I would like to summarize them like REVIGO does. I do not want to use REVIGO, since there's a limit of input GO terms. How would I do that?
Are you looking to remove the non-reduntant GO terms and to plot the graphs like in ReviGo?
I will tell you to have a look on BGI WEGO. It is a nice tool.
Hi, I want to use [REVIGO][1] **TreeMap** in order to summarize and visualize the GO terms related to my Differentially Expressed Genes/transcripts (DEGs). I found …
<p>Dear all,</p> <p>I have downloaded all GO terms of UniProt genes (<a href="ftp://ftp.ebi.ac.uk/pub/databases/GO/goa/UNIPROT/gp_association.goa_uniprot.gz">file</a>). I would like to calculate the Information Content (IC). According to my …
I performed gene enrichment on a list of differentially expressed genes using Plant MetGenMap and have a long list of enriched GO terms. However, some …
<p>Hello,</p> <p>I've downloaded GO terms from Phytozome using Biomart. I'd like to know what is the real source of those GO terms and the version …