Simulating single end reads with dwgsim
I am using dwgsim to simulate ion torrent reads. It seems the reads coming from an ion torrent machine are single end. However looking at the commandline options for dwgsim I am unable to see one for generating single end reads. Does anybody know of a way to do this?
• 3,004 views
•
link
updated
by
marina.v.yurieva
•
written
by
kautilya
•
written
by
kautilya
1 answer
Looks like single end is default: -S 0
https://github.com/nh13/DWGSIM/wiki/Simulating-Reads-with-DWGSIM
• 0 views
•
link
updated
by
Ram
•
written
by
marina.v.yurieva
•
written
by
marina.v.yurieva
Log in to answer this question.
More posts like this
-
Package for transcript assembly of reference-aligned ion torrent reads
written by cjwwfd •
-
Raw reads from Ion Torrent. Is it single-end reads or paired-end reads.
written by eudaims •
-
efficient algorithm for de novo assembly using de bruijn graph
written by StudentBio •
-
Simulation of single-end reads from reference genome
written by newscient •
-
Genome assembly contig ordering
written by mittu1602
-
Transcritome analysis using ion torrent sample
written by Kritika
-
Post Genome Assembly
written by div •
-
Pacbio Sequencing Reads Data Output
written by deliciayong •
-
Chip-Seq Peak Calling With Ion Torrent Reads
written by Ian
-
Ion Torrent Mapping
written by Ian
