GWAS and the related Data Sets
Hello everyone I am new to Bioinformatics and want to start with GWAS for a disease. How can I get good case control data for my GWAS that is publicly available?
snp
• 1,662 views
•
link
updated
by
Ram
•
written
by
mfaizyabali •
0 answers
No answers yet.
Log in to answer this question.
More posts like this
-
Where to find open access data of SNP arrays to perform GWAS
written by Yugan Gogul Muthukumar •Hello I'm am new to bioinformatics and I'm willing to do some GWAS analysis using PLINK but before applying for access, i want to practice …
-
PCA plot interpretation (single population)
written by Shane •Hi everyone, I am new to the bioinformatics field so I would appreciate your help. I have SNP data (Axiom array) for ~4,300 individuals from …
-
Differential expression analysis using DESeq2
written by prameelaawale •Hello everyone: I am new in using DEseq2. I am trying to analyze differential expression data using a publicly available data for my final project. …
-
power calculation for case vs tolerant control
written by khnHello, I previously asked the question, regarding the tools for sample size calculation for GWAS. It seems that the Power and Sample Size Calculation is …
-
How to perform GWAS for mapping plant disease resistant gene?
written by anikduttapotol •Hello, My name is Anik. I am new to this website. I want to perform genome-wide association mapping for plant disease-resistant genes. Since this field …
-
ChIP-seq Overlay Work Flow
written by G.Car •Hi everyone, I am very, very new to the bioinformatics field. I have been tasked with what seems like an insurmountable job, of taking publicly …
-
whole data sets
written by mendel.roth •Does anyone know where i can access genomics (WGS, exome, array, GWAS etc) data sets along with phenotype data for lipid/cardiovascular disease phenotypes? Does the …
-
Heat map using publicly available dataset
written by rakeshmbb •<p>Hi all,</p> <p>I am new in the area of bioinformatics. can anyone suggest me how can I generate heatmap using publicly available microarray and RNAseq …
-
Where to find the reference genome from the Human Genome Project?
written by ngokchau •Hello everyone, I am brand new to bioinformatics field so I hope I'm not asking anything inappropriate. I've been scouring the Internet to find reference …
-
SNP annotation in sequence
written by morgen •Hi, I am new to the field of bioinformatics and just starting to gather information about the available resources. I am sequencing a candidate gene …