Are KEGG XML (KGML) files missing from website?

Question

[jeremy.cox.2]

Hello,

I am interested in KEGG pathway ko01100. I want to get the KGML version so I can use KeggSCAPE with Cytoscape. I cannot get an appropriate KGML file to download.

Am I doing something wrong? Perhaps this is a temporary problem with the site?

DETAILS

This download link works: http://www.genome.jp/kegg-bin/download?entry=hsa01100&format=kgml

These links do not work. i.e., they return an empty result.

• http://www.genome.jp/kegg-bin/download?entry=hsa01100&format=kgml
• http://www.genome.jp/kegg-bin/download?entry=hsa01100&format=kgml

Which is very weird, because these links demonstrate that there is very much a graph tied to these

• http://rest.kegg.jp/get/ko01100/image
• http://rest.kegg.jp/get/map01100/image

Answer 1

[5heikki]

http://rest.kegg.jp/get/ko01100/kgml works