Find genes correlate with a given gene in gene expression heatmap(data analysis)

I have a gene expression heatmap of more than 3000 genes. I would like to find genes correlate with a given gene, how can I reduce the noise and narrow down the list to find the highly correlated genes?

Thank you

gene next-gen rna-seq r sequence

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updated 3.9 years ago by Ram

• written 10.9 years ago by BIOTIN •

1 answer

Software

cluster 3 or hclust in r can be used. Finding your gene of interest, then the most closed ones are highly correlated with it.

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written 10.9 years ago by Zhilong Jia

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