How to check the reads coverage of an area in ExAC, ESP6500, and 1000Genomes
Hi there, I want to check the reads coverage of several areas in ExAC, ESP6500, and 1000Genomes. Does these public DB provide DP/nt or similar data?
Thanks!
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Ram
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mavershang
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mavershang
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EVS data : page http://evs.gs.washington.edu/EVS/ / Download : ESP6500SI-V2.GRCh38-liftover.coverage.all_sites.txt.tar.gz "(sequencing coverage data for every site in our targets) "
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Pierre Lindenbaum
Coverage metrics for ExAC: ftp://ftp.broadinstitute.org/pub/ExAC_release/release0.3/coverage/
You can query the files using Tabix.
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