dbsnp for rat
Hi,
I need to download dpsnp of rat. I used dbsnp ftp site and found under organisms there are two data sets for rat rat_10116 and rat_10118 Are they different strains??
Moreover, dpsnp vcf files for rat has SAO which is defined as follows:
##INFO=<ID=SAO,Number=1,Type=Integer,Description="Variant Allele Origin: 0 - unspecified, 1 - Germline, 2 - Somatic, 3 - Both">
For snps with SAO=0, is there any possibility that they are somatic variants?
Thank you in advance
• 118 views
•
link
0 answers
No answers yet.
Log in to answer this question.
Hello Rna-Seq!
Questions similar to yours can already be found at:
We have closed your question to allow us to keep similar content in the same thread.
If you disagree with this please tell us why in a reply below. We'll be happy to talk about it.
Cheers!
PS: exact duplicate
Hi Pierre,
The link of dbsnp for rat is for my question!