phylogenetic analysis: 2.5 millions SNPs in 33 samples?
I have huge SNP data set from 33 samples. Any suggestion of software to do phylogenetic tree analysis. I tried MEGA6 and it crashed several times. Thanks
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sun.nation
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sun.nation
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How about RAxML? http://sco.h-its.org/exelixis/software.html
It has handled much larger populations on a small server, so may work for your needs.
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