Hello Guys, I am trying to convert window length into genomic coordinates using below mentioned commands, following a post **https://www.biostars.org/p/169171/** library(Homo.sapiens) human.genes = genes(TxDb.Hsapiens.UCSC.hg19.knownGene) human.genes …

I have a set of CNV GenomicRanges co-ordinates mapped to hg19 and need to lift them over to hg38. I have a solution to this …

Because seurat package is also technically available for bulk RNA-seq analysis and very easy to analyze for my bulk data with several conditions, I am …

I am trying to find the intersection of two GRanges objects. The first object has the coordinates for genes (grgenes below), the second mimics my …

<p>I have genomic data involving multiple genes of Yeast and wish to create a Genomic Browser with several tracks with Shiny and R. I would …

<p>I am new at using R for bioinformatics and have to generate graphics for the genome of yeast, with color coded genes and exon segments. …

<p>I have a very large file containing differentially methylated cytosines and another file containing annotations of genes including CDS etc. I need to get a …

<p>Hi,</p> <p>I was wondering where can I find transcriptional regulatory networks, of any organism, that include the type of edge i.e. activation or repression. There …

<p>Dear Biostars, <br /> I have a question concerning the generation of vcf (variant calling format) creation. <br /> Does anyone know of a tool …

<p>Hello, I would like to extract the genomic coordinates from a series of genes using a common substring of their gene names. For example, the …