Software for visualizing circular genomes mapping
Hello,
Does anybody know a software for visualizing circular genome mapping against sequenced reads to see their distribution on the ref genome?
I already tried using circus but it does not work on Windows and I do not have the "make" function to have it working on mac.
Thank you
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Circos definitely works on windows and Mac plus "Make is a utility that automatically builds executable programs and libraries from source code by reading files called makefiles which specify how to derive the target program". So, it works with the makefiles inside the source code you download.
You need to install
Xcodeand developer tools forMakeor if you just want the command line tools without Xcode, go here https://developer.apple.com/opensource/Hello, thank you for answer. Sorry, I mistyped, I meant Circus and it does not work on windows. I've been in contact with the developer.
About Mac, I cannot install Xcode as I have an older version of Mac OS (10.8) and the current Xcode works from OS 10.10 on.
Ah Circos, just to answer the second part, you can definitely get older version of XCode, depending on your version else you can use RCircos for quick plotting, you don't need the local installation of complete tool then. Also checkout, I think its already answered here.